Prof. Dr. HANDAN OLĞAR

PHYSICAL REVIEW E , cilt.96, sa.6, 2017 (SCI-Expanded)

The effect of vacancies and the substitution of p-block atoms on single-layer buckled germanium selenide

Ersan F., Arkin H., Akturk E.

RSC ADVANCES , cilt.7, sa.60, ss.37815-37822, 2017 (SCI-Expanded)

Investigation of adatom adsorption on single layer buckled germanium selenide

Arkin H., Akturk E.

APPLIED SURFACE SCIENCE , cilt.390, ss.185-189, 2016 (SCI-Expanded)

Gyration tensor based analysis of the shapes of polymer chains in an attractive spherical cage

JOURNAL OF CHEMICAL PHYSICS , cilt.138, sa.5, 2013 (SCI-Expanded)

Polymer-attractive spherical cage system

EUROPEAN PHYSICAL JOURNAL-SPECIAL TOPICS , cilt.216, sa.1, ss.181-190, 2013 (SCI-Expanded)

Ground-State Properties of a Polymer Chain in an Attractive Sphere

JOURNAL OF PHYSICAL CHEMISTRY B , cilt.116, sa.34, ss.10379-10386, 2012 (SCI-Expanded)

Structural behavior of a polymer chain inside an attractive sphere

ArkIn H., Janke W.

PHYSICAL REVIEW E , cilt.85, sa.5, 2012 (SCI-Expanded)

Simple flexible polymers in a spherical cage

Marenz M., Zierenberg J., Arkin H., Janke W.

CONDENSED MATTER PHYSICS , cilt.15, sa.4, 2012 (SCI-Expanded)

Residue length and solvation model dependency of elastinlike polypeptides

Bilsel M., Arkin H.

PHYSICAL REVIEW E , cilt.81, sa.5, 2010 (SCI-Expanded)

Comparison of the Parallel Tempering Algorithm and Multicanonical Method as Applied to Coarse-Grained Off-lattice Models for Folding Heteropolymers

JOURNAL OF STATISTICAL PHYSICS , cilt.139, sa.2, ss.326-332, 2010 (SCI-Expanded)

How conformational transition depends on hydrophobicity of elastin-like polypeptides

Arkin H., Bilsel M.

EUROPEAN PHYSICAL JOURNAL E , cilt.31, sa.3, ss.327-332, 2010 (SCI-Expanded)

DIPEPTIDE ADSORPTION ON Si(100)-2 x 1 ASYMMETRIC SURFACE BY FIRST PRINCIPLES

Aktürk E., Gülseren O., Arkin H., Çelik T.

INTERNATIONAL JOURNAL OF MODERN PHYSICS C , cilt.21, sa.1, ss.97-106, 2010 (SCI-Expanded)

Conformational properties of surfactant-like peptides with variable glycine tails

PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS , cilt.389, sa.2, ss.265-272, 2010 (SCI-Expanded)

Adsorption of a hydrophobic-polar-model heteropolymer in an attractive nanotube

PHYSICAL REVIEW E , cilt.80, sa.4, 2009 (SCI-Expanded)

Determination of the structure of the energy landscape for coarse-grained off-lattice models of folding heteropolymers

PHYSICAL REVIEW E , cilt.78, sa.4, 2008 (SCI-Expanded)

The structure of the free energy surface of coarse-grained off-lattice protein models

Akturk E., OLĞAR H., Celik T.

INTERNATIONAL JOURNAL OF MODERN PHYSICS C , cilt.18, sa.1, ss.99-106, 2007 (SCI-Expanded)

Study of elastin sequences with solvent induced force field

INTERNATIONAL JOURNAL OF MODERN PHYSICS C , cilt.16, sa.9, ss.1339-1346, 2005 (SCI-Expanded)

Solvation effects on free energy surface of polyalanine

Gokoglu G., OLĞAR H., Akturk E., Celik T.

INTERNATIONAL JOURNAL OF MODERN PHYSICS C , cilt.16, sa.9, ss.1489-1496, 2005 (SCI-Expanded)

Conformational analysis of polyalanyl chains

Gokoglu G., OLĞAR H., Celik T.

INTERNATIONAL JOURNAL OF MODERN PHYSICS C , cilt.16, sa.3, ss.455-463, 2005 (SCI-Expanded)

Multicanonical study of coarse-grained off-lattice models for folding heteropolymers

Bachmann M., OLĞAR H., Janke W.

PHYSICAL REVIEW E , cilt.71, sa.3, 2005 (SCI-Expanded)

A combination of replica exchange Monte Carlo and energy landscape paving algorithms to increase the effectiveness of conformational sampling

INTERNATIONAL JOURNAL OF MODERN PHYSICS C , cilt.15, sa.7, ss.933-937, 2004 (SCI-Expanded)

Simulations of peptide models in a solvent

INTERNATIONAL JOURNAL OF MODERN PHYSICS C , cilt.15, sa.2, ss.223-231, 2004 (SCI-Expanded)

Searching low-energy conformations of two elastin sequences

EUROPEAN PHYSICAL JOURNAL B , cilt.37, sa.2, ss.223-228, 2004 (SCI-Expanded)

A fast and effective conformational search method for peptides

INTERNATIONAL JOURNAL OF MODERN PHYSICS C , cilt.14, sa.7, ss.985-991, 2003 (SCI-Expanded)

Determination of conformational transitions of peptides from energy landscape

INTERNATIONAL JOURNAL OF MODERN PHYSICS C , cilt.14, sa.5, ss.567-574, 2003 (SCI-Expanded)

Structure of energy landscape of short peptides

INTERNATIONAL JOURNAL OF MODERN PHYSICS C , cilt.14, sa.1, ss.113-120, 2003 (SCI-Expanded)

Comparison of the ELP and multicanonical methods in simulation of the heptapeptide deltorphin

EUROPEAN PHYSICAL JOURNAL B , cilt.30, sa.4, ss.577-580, 2002 (SCI-Expanded)

Efficiency of the multicanonical simulation method as applied to peptides of increasing size: The heptapeptide deltorphin

Yasar F., OLĞAR H., Celik T., Berg B., Meirovitch H.

JOURNAL OF COMPUTATIONAL CHEMISTRY , cilt.23, sa.12, ss.1127-1134, 2002 (SCI-Expanded)

Multicanonical simulations of some peptides

OLĞAR H., Yasar F., Celik T., Berg B., Meirovitch H.

COMPUTER PHYSICS COMMUNICATIONS , cilt.147, sa.1-2, ss.600-603, 2002 (SCI-Expanded)

Spinodal decomposition in 3 d q=3 potts model

NUCLEAR PHYSICS B-PROCEEDINGS SUPPLEMENTS , cilt.106, ss.926-928, 2002 (SCI-Expanded)

Molecular modeling of two hexapeptide repeat motifs of HMW glutenin subunits

OLĞAR H., Yasar F., Celik T., Celik S., Koksel H.

INTERNATIONAL JOURNAL OF MODERN PHYSICS C , cilt.12, sa.2, ss.281-292, 2001 (SCI-Expanded)

Multicanonical simulations of five tetrapeptide sequences in the central domain of HMW glutenin

OLĞAR H., Yasar F., Celik T., Celik S., Koksel H.

INTERNATIONAL JOURNAL OF MODERN PHYSICS C , cilt.11, sa.8, ss.1595-1606, 2000 (SCI-Expanded)

Study of phase conversion in three-dimensional q=3 Potts model

Taşdizen Özyurt B., Olğar H.

INTERNATIONAL JOURNAL OF MODERN PHYSICS C , cilt.11, sa.7, ss.1313-1320, 2000 (SCI-Expanded)

Phase separation in a weak first-order phase transition

OLĞAR H., Celik T., Berg B., Meyer-Ortmanns H.

PHYSICA A , cilt.274, sa.1-2, ss.320-324, 1999 (SCI-Expanded)

Study of phase separation in a first-order phase transition: Nucleation versus spinodal decomposition

OLĞAR H., Celik T., Berg B., Meyer-Ortmanns H.

INTERNATIONAL JOURNAL OF MODERN PHYSICS C , cilt.10, sa.7, ss.1261-1269, 1999 (SCI-Expanded)

Hakemli Kongre / Sempozyum Bildiri Kitaplarında Yer Alan Yayınlar

Adsorption of dopamine on the b-AsP surface based on first principles

Kaya P., Tercan O., Kaderoğlu Ç., Aktürk E., Olğar H.

COMPHYS22- 23rd International NTZ-Workshop on New Developments in Computational Physics, Leipzig, Almanya, 24 - 26 Kasım 2022, ss.1

Functionalization of Boron-Carbide monolayer for the adsorption of organic molecules

Shukurov N., Kaderoğlu C., Aktürk E., Olğar H.

22nd International NTZ-Workshop on New Developments in Computational Physics, Leipzig, Almanya, 25 - 27 Kasım 2021, ss.5

EXAMINATION OF INTERACTIONS BETWEEN SOME GRAPHENELIKE TWO-DIMENSIONAL MXENE MATERIALS WITH NEUROTRANSMITTER MOLECULES AND AMINO ACIDS

Ilgaz Aysan I., Olğar H., Akturk E.

TÜRK FİZİK DERNEĞİ 37. ULUSLARARASI FİZİK KONGRESİ, Muğla, Türkiye, 1 - 05 Eylül 2021, ss.113

ADSORPTION OF GLYCINE ON THE ASP MONOLAYER SURFACE

Tercan O., Kaya P., Kaderoğlu Ç., Aktürk E., Olğar H.

ADSORPTION OF GLYCINE ON THE ASP MONOLAYER SURFACE, Muğla, Türkiye, 1 - 05 Eylül 2021, ss.238

PERFORMANCE OF INTRINSIC BC NANOLAYER FOR THE ADSORPTION OF DOPAMINE AND 5-FLUOROACIL(5FU): A DFT STUDY

Shukurov N., Kaderoğlu Ç., Aktürk E., Olğar H.

TÜRK FİZİK DERNEĞİ 37. ULUSLARARASI FİZİK KONGRESİ,, Muğla, Türkiye, 1 - 05 Eylül 2021, ss.238

Investigation of the Conformational Space of Hydrophobic-Polar Model Proteins

Humboldt Kolleg Ankara, Ankara, Türkiye, 11 - 13 Haziran 2014, ss.1

Simple Polymer in a Spherical Cage

Marenz M., Zierenberg J., Olğar H., Janke W.

Humboldt Kolleg Ankara, Ankara, Türkiye, 11 - 13 Haziran 2014, ss.1

Polymer adsorption in an attractive sphere

MECO38, Trieste, İtalya, 25 - 27 Mart 2013, ss.1

Polymers in a Spherical Cage

Marenz M., Zierenberg J., Olğar H., Janke W.

Comphys12, Leipzig, Almanya, 29 Kasım - 01 Aralık 2012, ss.2

Thermodynamics of a polymer chain in a spherical cage

Comphys12, Leipzig, Almanya, 29 Kasım - 01 Aralık 2012, ss.1

Comformational Behavior of a polymer chain in an Attractive Spherical Cage

SFB/TR102 Fall Meeting Miniworkshop Brehna, Halle, Almanya, 19 Ekim 2012, ss.1

Polymer Chain in an Attractive Spherical Confinement

StatMech Meeting, Mainz, Almanya, 19 - 21 Eylül 2012, ss.1

Polymer Chain inside Confinement

Alexander von Humboldt Foundation, Network Meeting, Kiel, Almanya, 8 - 10 Şubat 2012, ss.1

Simulations of elastin like proteins Elastin türü proteinlerin simülasyonu

Olgar H., Bilsel M.

2010 15th National Biomedical Engineering Meeting, BIYOMUT2010, Antalya, Türkiye, 21 - 24 Nisan 2010

Determination of the Adsorption of Hydrophobic-Polar Models Proteins on Different Surfaces

Olğar H., Alaboz H.

16. Statistical Physics Days, İstanbul, Türkiye, 25 - 27 Haziran 2009, ss.1

Molecular Modeling of Elastinlike Polypeptides

Bilsel M., Olğar H.

16. Statistical Physics Days, İstanbul, Türkiye, 25 - 27 Haziran 2009, ss.1

Structural Transitions Mechanism in Protein Models

L’oreal Young Women Scientist Meeting, İstanbul, Türkiye, 16 Mayıs 2009, ss.1

Study of the conformational changes of hydrophobic – polar polymer chain near a hydrophobic chain

Olğar H., Alaboz H.

MECO34: 34rd Conference of the Middle European Cooperation in Statistical Physics , Leipzig, Almanya, 29 Nisan - 02 Mayıs 2009, ss.1

Conformational Transition in Elastin Polypeptide with Different Residue Length

Arkin H., Bilsel M.

7th International Conference of the Balkan-Physical-Union, Alexandroupoli, Yunanistan, 9 - 13 Eylül 2009, cilt.1203, ss.1211-1216

The energy landscape of Hydrophobic-Polar Protein Model

Conference on Knots and Other Entaglements in Biopolymers: Topological and Geometrical Aspects of DNA, RNA and Protein Structures, Trieste, İtalya, 15 - 19 Eylül 2008, ss.1

First Principles Investigation of Amino Acid adsorption on a Surface

Aktürk E., Olğar H., Gülseren O., Çelik T.

MECO33: 33rd Conference of the Middle European Cooperation in Statistical Physics, Wels, Avusturya, 14 - 16 Nisan 2008, ss.1

Generalized Ensemble Simulations of off-lattice Protein Models,

Turkish Academy of Sciences Outstanding Young Scientist Annual Meeting, Erzurum, Türkiye, 01 Eylül 2007, ss.1

First Principles Investigation of Amino Acid Adsorption on Si(100)-2x1 Asymetric Surface,

Aktürk E., Gülseren O., Olğar H., Çelik T.

13. Statistical Physics Days, İstanbul, Türkiye, 06 Temmuz 2006 - 08 Temmuz 2007, ss.1

Simulations of Biological Molecules by Generalized-Ensemble Algorithms.

12. Statistical Physics Days, İstanbul, Türkiye, 30 Haziran - 02 Temmuz 2005, ss.1

Multicanonical Simulations of AB model

Olğar H., Bachmann M., Janke W.

Conference on Computational Physics, Genoa, İtalya, 31 Ağustos - 04 Eylül 2004, ss.1

Conformational Search Algorithms for All-Atom Protein Models