Genetic analysis of central Anatolian grapevine (Vitis viniferaL.) germplasm by simple sequence repeats

YILMAZ F., Shidfar M., Hazrati N., Kazan K., Ozmen C. Y., Uysal T., ...Daha Fazla

TREE GENETICS & GENOMES, cilt.16, sa.4, 2020 (SCI-Expanded) identifier identifier

  • Yayın Türü: Makale / Tam Makale
  • Cilt numarası: 16 Sayı: 4
  • Basım Tarihi: 2020
  • Doi Numarası: 10.1007/s11295-020-01429-z
  • Dergi Adı: TREE GENETICS & GENOMES
  • Derginin Tarandığı İndeksler: Science Citation Index Expanded (SCI-EXPANDED), Scopus, Agricultural & Environmental Science Database, BIOSIS, Biotechnology Research Abstracts, CAB Abstracts, Environment Index, Veterinary Science Database
  • Anahtar Kelimeler: Vitis vinifera L, Microsatellite, Structure analysis, Central Anatolia, Wild germplasm, L. CULTIVARS, WILD, DIVERSITY, SSR, ORIGINS, ACCESSIONS, MARKERS, DOMESTICATION, RELATEDNESS, EVOLUTION
  • Ankara Üniversitesi Adresli: Evet

Özet

The Anatolian peninsula otherwise known as Asia Minor is considered one of the centers that shaped grape (Vitisspp.) evolution and domestication. This region with diverse ecological conditions also has a long history of viticulture and growing grapes has been a part of the local culture since very old times. However, very little information is available on genetic analysis of Anatolian grape germplasm. This study reports on genetic analyses of 88 grapevine cultivars from Central Anatolia using 17 microsatellite (SSR) loci. The average number of alleles per locus was 9.18, ranging from 5 to 15. The highest heterozygosity rate was obtained for the SSR loci "VVS2" and "VMC2H4." Genetic distances between populations ranged from 0.056 to 0.207 and two cases of identical, seven cases of homonymous, and nine cases of synonymous grape cultivar groups were identified. Based on comparisons with internationalVitisdatabases, it has been determined that "Moldova-Coarna Neagra" cultivar is synonymous with some Anatolian cultivars. In addition, investigation of the genetic diversity of 20 genotypes of Anatolian wild germplasm revealed a higher level of genetic diversity in wild populations than in cultivated ones at the studied microsatellite loci. The results reported here should not only contribute towards better management of the grape germplasm of the region but also provide new insights into grape domestication.